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Biochemistry Computational Research Facility (BCRF)

Biochemistry Department – UW Madison
Overlay of classroom and DNA structure

The Biochemistry Computational Research Facility (BCRF) provides access to a computational computer cluster and hands-on tutorials.

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Biochemistry Compute Cluster

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These are a few of the main focus of the workshops in terms of software and areas of study: Molecular Graphics -PyMOL, Chimera, SybylX-, Molecular -Modelling MODELLER-, Data Analysis - R, Python, Markdown, Reproducible Research,…. Guest speakers are invited for additional topics or software demonstration (e.g. EndNote, MatLab…) …

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Please contact Jean-yves Sgro (jsgro@wisc.edu) for authorized access.

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BCRF tutorials are typically two hours long and involve a lot of hands-on practice. All tutorial materials are available for individuals to use after courses or on their own.

Class size is kept small for better interaction and hands-on opportunities but occasionally can be augmented with two or three attendees bringing their laptops.

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Jean-Yves Sgro

Ph.D.

Distinguished, Senior Scientist

jsgro@wisc.edu

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Jean-Yves has been at UW since 1986  after a Master in Physiology and a Ph.D. in Cellular and Molecular Biology from the Joseph Fourier University, Grenoble, France, researched at the European Molecular Biology Laboratory (EMBL) where he already used large computers for sequence analysis.

At the Institute for Molecular Virology (IMV) he continued developing computer expertise in addition to his wet-lab research – 3D molecular visualization (virusworld), RNA-folding predictions, sequence and data analysis…

In 1996 he joined the UW Biotechnology Center to better help Campus biologists analyze and visualize their data while continuing research at IMV until 2014 when this part-time position was transferred to the Biochemistry department where he organizes and teaches hands-on tutorials on molecular graphics, data analysis as a support to the department personnel.

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  • Molecular Graphics
  • Computational Methods
  • Reproducible Research

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Pubmed Listed Publications

Danger Virus movie: 2 minutes segment featuring Dr. Sgro

 

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  • PhD in Cellular and Molecular Biology, 1986

    Université Joseph Fourier, Grenoble, France

  • EMBL Alumni

    European Molecular Biology Laboratory (EMBL-Grenoble)